homogentisate 1,2-dioxygenase (HGD) - 6233 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.519
gtaagaaaccatctgacaagtttgctatggcttcttcagccaaaatttatggaagtttct  c.15+60

         .         .         .         .         .         .  g.579
gagaacttcagggtatcagagttggaaaagacttagagaggccctggttcaaacccctgt  c.15+120

         .         .         .         .         .         .  g.639
gttcagaggcttccctgtggtgtctgtgggcacagctggagctgaagaacaagggaaagg  c.15+180

         .         .         .         .         .         .  g.699
tgataaaggaaagaaatgaagctcttattggtcatcccttgcctttgttcatttcaatta  c.15+240

         .         .         .         .         .         .  g.759
ttgtcttggaaatctgtagacatcctaagagctcccctccactacggacatgcacgtttc  c.15+300

         .         .         .         .         .         .  g.819
tctctatgtctttttcccaacccctgctctgacaccttcccattgctgcagcctcatgga  c.15+360

         .         .         .         .         .         .  g.879
ccacttccggtgaccagttagatatgcttgatctatttagttaattaaggctctgaatca  c.15+420

         .         .         .         .         .         .  g.939
gcccttggccagaagaagcacctcctctaggaaatcattccttctttttagtaatacgca  c.15+480

         .         .         .         .         .         .  g.999
attgaaaagtatgtgtgggttatgtgctgttaggtgctaagcattttagctatgaattaa  c.15+540

         .         .         .         .         .         .  g.1059
ctcataatcctcaaaataaatctggggtatagagagaggttcttgtttcaattagaaaag  c.15+600

         .         .         .         .         .         .  g.1119
taatgcttggagagactatgatttgcccaaggtcactgccaatagatgacttgattagaa  c.15+660

         .         .         .         .         .         .  g.1179
gcagggtatgtttgaatgcgaagtccaggctcaaaaaggggccttagtggctcctactag  c.15+720

         .         .         .         .         .         .  g.1239
actggtatcttaaggcaaggaaaacagaatatgtccctaatatctaaaaccatgcctagt  c.15+780

         .         .         .         .         .         .  g.1299
gcccaggccaggcttgaatcaatgctcaacgcatgcatgtgtaactgaacagaactgccc  c.15+840

         .         .         .         .         .         .  g.1359
agaaccttggctcaggccaagtaggccagaccaccccacaacagacatcttccctgaatg  c.15+900

         .         .         .         .         .         .  g.1419
cagggtttgagaagtgccctaatgccctctaactgatgctgagtttgaagaatccatcag  c.15+960

         .         .         .         .         .         .  g.1479
ttaaggggaggtgtttctgagtttgaagaatcaaacaccttcctaattggtaggaatcct  c.15+1020

         .         .         .         .         .         .  g.1539
gaaaacactccacaccggagtaaaagactttggttttttatctttatgcctgactaaaag  c.15+1080

         .         .         .         .         .         .  g.1599
ttaactctcattctttcattcagcaaatattttgtgctagtgcatgacactgcagattaa  c.15+1140

         .         .         .         .         .         .  g.1659
tatcgtagatgaactgagtctgggctaggtagagtcaaaaaaaaatttcctaaaggagcc  c.15+1200

         .         .         .         .         .         .  g.1719
tgtacctaaactgagtcttcagagagaagttggaactggcaaagtgaggaaggacggggt  c.15+1260

         .         .         .         .         .         .  g.1779
ctggagggaagagtgagtgcaaaggcacagcacatacagaatgcctgcatgctctagaat  c.15+1320

         .         .         .         .         .         .  g.1839
ccaaaactgtgtcagccaaatttgagttgatggagggacagccaaactgagatacccagg  c.15+1380

         .         .         .         .         .         .  g.1899
cggtggttggatttatggatctggatttcaggggagtgggcagggctaggggaatagaac  c.15+1440

         .         .         .         .         .         .  g.1959
tgagggtcatgatgtcagtggtaggagttgaagtcttggaagaaagagtagatagaaact  c.15+1500

         .         .         .         .         .         .  g.2019
ttgttttctgatgaacattctatgaggaagttcagcagaggttggaaacatctttaccat  c.15+1560

         .         .         .         .         .         .  g.2079
ttataaataaattttatgtaaaatcctatcctgctgtcatgtttaagcaacttattatgc  c.15+1620

         .         .         .         .         .         .  g.2139
acagcaccaggacatcaatgtaaattgcatgccagtctttgctctcagtttcaaaggcat  c.15+1680

         .         .         .         .         .         .  g.2199
tcttccctgcctgctgtctaatctttacaaagaaaggttaactccagaggtcaggaatct  c.15+1740

         .         .         .         .         .         .  g.2259
gaacacagaaaaccagattgcatcatattcattctaatcaataaacattatataattttt  c.15+1800

         .         .         .         .         .         .  g.2319
aaaactgtttctcatcttttatttcttcattttaatgaatatgtcaacacaaagccgtaa  c.15+1860

         .         .         .         .         .         .  g.2379
atgaaatcacatttacacaaaagtacaactggggtaagaaaattcaaaagataaagtaat  c.15+1920

         .         .         .         .         .         .  g.2439
aaaattaaatttaaaatgaaataccctatgtatttgagtaagttgcttagcttctcccaa  c.15+1980

         .         .         .         .         .         .  g.2499
ccttggtttcctcatttctaaaacgaagaacttgcttaatattcaggctctgggccccac  c.15+2040

         .         .         .         .         .         .  g.2559
caccaaatccttgattcactggctctgggtctgtatgtaacaagcttctggagtgattct  c.15+2100

         .         .         .         .         .         .  g.2619
aatgattagccagagacaggacctactattctacgtaactgatttcctcttgctgctgta  c.15+2160

         .         .         .         .         .         .  g.2679
aaaaattaccacaaatttattggcttaaaacaacacaaatgtattatcttgaagttgtgg  c.15+2220

         .         .         .         .         .         .  g.2739
aggtcagaagtctgaaatcggtttcactgggctaaagtcgaggtgtcagtgtggctgttt  c.15+2280

         .         .         .         .         .         .  g.2799
cttctggagactctatgagagattgtgttttcctgccttttccatggattctgtttcctc  c.15+2340

         .         .         .         .         .         .  g.2859
ttctagaggctacccacattccttggtttgtagcctcttcctcgatcttcaaaaaaatgt  c.15+2400

         .         .         .         .         .         .  g.2919
atctctgcttttgtaatcacgtcacattttctcctcttataagtcaaatctccctttgcc  c.15+2460

         .         .         .         .         .         .  g.2979
tccctcttataatgacacttgtgattacatttaggatacacccaaataattaggatatct  c.15+2520

         .         .         .         .         .         .  g.3039
ccccatcccaagatccttaattatatatgcaaaagtctgtttggctagaaaagataatac  c.15+2580

         .         .         .         .         .         .  g.3099
tcacaggtttcaggggttaagccatacatatctttcagagtgagccattagccattattc  c.15+2640

         .         .         .         .         .         .  g.3159
agcctactgcgataatgtgcaagttccctttacaatctatgttctatgttcccatcaagg  c.15+2700

         .         .         .         .         .         .  g.3219
ttaattagaaatattagactctttttccacagaaaaaaaaaatgtagcagtagtttcatc  c.15+2760

         .         .         .         .         .         .  g.3279
tctaccctgacttctctctctttccttcatgcccagtaagaggaagtgaggtgcaccatc  c.15+2820

         .         .         .         .         .         .  g.3339
tgttcatctcatcaggtgttacctagaatcagagtcaggagaaagcacctcataaaacta  c.15+2880

         .         .         .         .         .         .  g.3399
ctctgacaagtaaaccatatcctggggaccaggtgagaattaaaaagctgtatactcata  c.15+2940

         .         .         .         .         .         .  g.3459
agctgccaaagagctgatggtactgaagtcacatggagctcaggaatttattcttgcatt  c.15+3000

         .         .         .         .         .         .  g.3519
tagaaagtatgcatataattctctcgaaaagaaatgaaatcatatttttctgtcggatca  c.15+3060

         .         .         .         .         .         g.3576
aattattcagaaatccgaactgtagaaaacatacaaacacacttgcttaatgttagc  c.15+3117

--------------------- middle of intron ---------------------
          .         .         .         .         .           g.3632
    tttttaatcttatttttgtacacagtatacttttacataggcactgaaccagctgg  c.16-3061

.         .         .         .         .         .           g.3692
aaatgaatgcttggattttcgcagctgataaaagcagagttcagattctgtccttgagct  c.16-3001

.         .         .         .         .         .           g.3752
caatgtctggagaaagcagctgtgaatactgcttccttaattcagatgcctttggccgtg  c.16-2941

.         .         .         .         .         .           g.3812
aggggcatggcattttaaagctgcaataaactctgtactttttctctcaggggattagaa  c.16-2881

.         .         .         .         .         .           g.3872
aaaccaattgatttgatagtgactcagcagttttcaccttcctctttagccaatgccctg  c.16-2821

.         .         .         .         .         .           g.3932
cagctaagattgagaaacggattcagaactcacacctcttggtgcttggtggctcccttc  c.16-2761

.         .         .         .         .         .           g.3992
caaaccatcagctgttctttctactttctttcctattttttaaagcacagtctgaatcaa  c.16-2701

.         .         .         .         .         .           g.4052
gtgcttcagaaccatttatactaactcgtgttccaaacacataaccctgaaccctcttct  c.16-2641

.         .         .         .         .         .           g.4112
aaggccaccagttacaaagaatggggaaggttaatgagtaactccaccagtgcctgccag  c.16-2581

.         .         .         .         .         .           g.4172
aaagctcagctgtactccagccttccttcctctcttgcagagagaaacaatgcggcagtt  c.16-2521

.         .         .         .         .         .           g.4232
gaacaaagcgaaggcactgtaatgcccagtggcttcagtcacaggctggtctaaaattcc  c.16-2461

.         .         .         .         .         .           g.4292
atttcacagaattgaagataatttggggttattaccaattctcagcagctcaaattcaat  c.16-2401

.         .         .         .         .         .           g.4352
cccgttgatggtgagcatggggttcattttgagagtagaaaattggatgcagtggagaat  c.16-2341

.         .         .         .         .         .           g.4412
cagaatgttggatggtctctgccatttccccaaagatatcatcctaactgcatgctgctg  c.16-2281

.         .         .         .         .         .           g.4472
cttttaacaaatcagtatacaacttagtattttttgtgttgacaaattttcaaatataca  c.16-2221

.         .         .         .         .         .           g.4532
aaatattgagtctgaaggcaaaaagaataatttttcacttccattgcttcctaggtcata  c.16-2161

.         .         .         .         .         .           g.4592
acattcacatctgatatttcttccaaatacagactgttgttggcctgatcatcactcaca  c.16-2101

.         .         .         .         .         .           g.4652
catccaggcttgttacatctccacgccactgagtatcagggaacctgccccaatattcac  c.16-2041

.         .         .         .         .         .           g.4712
gtaggttcttttctattttccctaagcgtcggccaactttagaaataaagggacagagta  c.16-1981

.         .         .         .         .         .           g.4772
caaaagagagaaattttaaagccgggcatccgggggaggcatcacatttcggtaggttcc  c.16-1921

.         .         .         .         .         .           g.4832
gtgatgccccacaagccacaaaaaccagcaagtttgtattagggattttcaaatggggag  c.16-1861

.         .         .         .         .         .           g.4892
gcagtgtgcaaataggtgtgggtcacagacatcaagtactttacaaggtaatagaatatc  c.16-1801

.         .         .         .         .         .           g.4952
acaaggcaagtggaggcagggtgagatcacaggaccacaggaccgaggcgaaattaaaat  c.16-1741

.         .         .         .         .         .           g.5012
tgctaatgaagtttcgggcaccattgtcattgataacatcttatcaggagacagggtttt  c.16-1681

.         .         .         .         .         .           g.5072
taggatcaactggtctgaccaaaatttattaggcgggaatttcctcttcctaataagcct  c.16-1621

.         .         .         .         .         .           g.5132
gggagcgctgtgggagactggggtctatttcacccctgcagtctcgaccataagagacag  c.16-1561

.         .         .         .         .         .           g.5192
gcgcacctggaggggggctgtttataagcctatacctcctggctcgtattctctttctca  c.16-1501

.         .         .         .         .         .           g.5252
gggatgttccatgctgagaaaaagaattcagcgatatttctcccatttgcttttgaaaga  c.16-1441

.         .         .         .         .         .           g.5312
agagaaatatggctctgttctgcctggctcaccagcagtcagagtttaaggttatctctc  c.16-1381

.         .         .         .         .         .           g.5372
ttattccctgaacaattgctgttatcctgttcttttttcaaggtgtccacatttcatgtt  c.16-1321

.         .         .         .         .         .           g.5432
gctcaaacacacatgctgtacaatttgtgcagttaatgcaattattacagggtcctgagg  c.16-1261

.         .         .         .         .         .           g.5492
caatatacatcctcctcagctgacaggattaagagattaaagtaaagacaggcataaatc  c.16-1201

.         .         .         .         .         .           g.5552
acaaggatattgactggggaagtgataagtgtccatgaaatctttacaatttatgtttag  c.16-1141

.         .         .         .         .         .           g.5612
agattgcagtaaagacaggcataagaaattacaaaagtattaatttggggaactaataaa  c.16-1081

.         .         .         .         .         .           g.5672
tgtccatgaaatcttcacaatccacgaacttctgccatggcttcagctgatccctccgtt  c.16-1021

.         .         .         .         .         .           g.5732
tggagtcccagacttcccgcaacaactgagaactctggagggcctacccttcacccactt  c.16-961

.         .         .         .         .         .           g.5792
ccacccttcttatatctcttaaggagctgtgttcagatggttacatttcgcttgctgagc  c.16-901

.         .         .         .         .         .           g.5852
aagactgcattttcattatcctgggctaaaatcaattggtatttaagttagagcaaaaag  c.16-841

.         .         .         .         .         .           g.5912
ggttctaaccctatttacagcagcacacatacacttacattagaattggctttaagggaa  c.16-781

.         .         .         .         .         .           g.5972
aaattcaatcaatcgacaaatttccactgattaccttctatgagccaagactgccatagt  c.16-721

.         .         .         .         .         .           g.6032
ctcagccttcatgcagcttataggctagcaaaaaagccagacagtgcacaagaactcaca  c.16-661

.         .         .         .         .         .           g.6092
agtgtgttgagtgttgcaagagtaagtttcaggggctctccatgacttacctggttgaga  c.16-601

.         .         .         .         .         .           g.6152
aaccctttaactttttttttcctctgggtgtaaagtgaagagatggcaatcagagtaggt  c.16-541

.         .         .         .         .         .           g.6212
tccattgtgtcattgtgaaaagatgctgggctggcgtgtctcctgaaggccacccatatc  c.16-481

.         .         .         .         .         .           g.6272
tttaaactttattttcatgcattcgcacaaatatagatgtgttccatagatgaggcagat  c.16-421

.         .         .         .         .         .           g.6332
agcagaggcttctgcctacagcaaggctagtttggagagggttttgctgtcagggttgga  c.16-361

.         .         .         .         .         .           g.6392
cccacacacctcttcatagatgctttttcttttttttcccagagtttgaaagggaaatgg  c.16-301

.         .         .         .         .         .           g.6452
agtctcaagttcagggaggttacagtgtagacccacaaatcagctaagtacagctaaggg  c.16-241

.         .         .         .         .         .           g.6512
tggagaagtctatgcaatatccagcactcttctgattaattagaagtctttaaaattcac  c.16-181

.         .         .         .         .         .           g.6572
agaaaccatattgtcttccctaaatgattcatatgtcaagacacagtaaagatattatat  c.16-121

.         .         .         .         .         .           g.6632
gtggaacatcatacacaaacataggtccatatagaaattcttaccttagtaaactgccaa  c.16-61

.         .         .         .         .         .           g.6692
ttttctgaaatgctctttaaatcctgctaatggtggcatttgtgtctttgtcacctacag  c.16-1


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