LOVD - Variant listings for HGD

About this overview [Show]

Patient data (#0000292)
Patient ID AKU_DB_123
Disease AKU
Reference Zatkova et al. (2012), United Kingdom (Great Britain):Liverpool
Remarks Compound heterozygous
# Reported 1
Geographic origin United Kingdom
Patient/Affected_per_Family 2
Families Patients 1
Submitter Jeannette Usher

Variant data
Allele Parent #1
Reported pathogenicity Pathogenic
Concluded pathogenicity Probably pathogenic
DB-ID AKU_00024
Exon 05i
DNA change c.342+1G>T
RNA change r.(spl?)
Protein p.(Leu95_Ser114del)
Original description ivs5+1G>T
Links rs397515518
Variant remarks aberrant splicing (DS)/exon skipping/in frame deletion?
Predicted Mutation Effect** -
Reference de Bernabe et al. (1998)
Mutation HOT-SPOT c.342+1G
Allele code AKU_DB_123a
Type substitution
Re-site -
Frequency -
Template DNA
Technique SEQ
Location intron

2 entries in HGD

Path.
Allele Descending
Ascending
DB-ID Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
Original description Descending
Ascending
Links Descending
Ascending
Variant remarks Descending
Ascending
Predicted Mutation Effect** Descending
Ascending
Reference Descending
Ascending
Mutation HOT-SPOT Descending
Ascending
Allele code Descending
Ascending
Type Descending
Ascending
Re-site Descending
Ascending
Frequency Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Location Descending
Ascending
+/+? Parent #1 AKU_00024 05i c.342+1G>T r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_DB_123a substitution - - DNA SEQ intron
+/+? Parent #2 AKU_00145 08 c.472_496del r.(?) p.(Pro158Thrfs*25) P158fs; before c.470-1_494del25;p.(Val157Glufs*11) - deletion/exon skipping/frameshift? - Zatkova et al. (2012) - AKU_DB_123b deletion - - DNA SEQ exon