LOVD - Variant listings for HGD

About this overview [Show]

Patient data (#0000370)
Patient ID AKU_DB_197
Disease AKU
Reference Nemethova et al. (2016), Slovakia (Slovak Republic):Bratislava
Remarks Compound heterozygous
# Reported 1
Geographic origin Canada
Patient/Affected_per_Family 1
Families Patients 1
Submitter Andrea Zatkova

Variant data
Allele Parent #1
Reported pathogenicity Pathogenic
Concluded pathogenicity Pathogenic
DB-ID AKU_00013
Exon 03
DNA change c.175delA
RNA change r.(?)
Protein p.(Ser59Alafs*52)
Original description S59fs (R58fs)
Variant remarks frameshift
Predicted Mutation Effect** -
Reference de Bernabe et al. (1999b)
Mutation HOT-SPOT -
Allele code AKU_DB_197a
Type deletion
Re-site -
Frequency -
Template DNA
Technique SEQ
Location exon

2 entries in HGD

Path.
Allele Descending
Ascending
DB-ID Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
Original description Descending
Ascending
Variant remarks Descending
Ascending
Predicted Mutation Effect** Descending
Ascending
Reference Descending
Ascending
Mutation HOT-SPOT Descending
Ascending
Allele code Descending
Ascending
Type Descending
Ascending
Re-site Descending
Ascending
Frequency Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Location Descending
Ascending
+/+ Parent #1 AKU_00013 03 c.175delA r.(?) p.(Ser59Alafs*52) S59fs (R58fs) frameshift - de Bernabe et al. (1999b) - AKU_DB_197a deletion - - DNA SEQ exon
+/+? Parent #2 AKU_00048 08 c.473C>T r.(?) p.(Pro158Leu) P158L missense Protomer destabilisation Vilboux et al. (2009) CpG AKU_DB_197b substitution (+)PstI, SfcI; (-)BslI, AciI - DNA SEQ exon