LOVD - Variant listings for HGD

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Patient data (#0000694)
Patient ID AKU_DB_394
Disease AKU
Reference Danda et al. (2020), India:Vellore
Remarks Homozygot
# Reported 1
Geographic origin India
Patient/Affected_per_Family 1
Families Patients 1
Submitter Sumita Danda

Variant data
Allele Parent #1
Reported pathogenicity Pathogenic
Concluded pathogenicity Probably pathogenic
DB-ID AKU_00053
Exon 08
DNA change c.504G>C
RNA change r.(?)
Protein p.(Glu168Asp)
Original description E168D
Links rs780173554
Variant remarks missense
Predicted Mutation Effect** Protomer destabilisation, Hexamer disruption
Reference Phornphutkul et al. (2002)
Mutation HOT-SPOT CpG
Allele code AKU_DB_394a
Type substitution
Re-site -
Frequency -
Template DNA
Technique SEQ
Location exon

2 entries in HGD

Path.
Allele Descending
Ascending
DB-ID Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
Original description Descending
Ascending
Links Descending
Ascending
Variant remarks Descending
Ascending
Predicted Mutation Effect** Descending
Ascending
Reference Descending
Ascending
Mutation HOT-SPOT Descending
Ascending
Allele code Descending
Ascending
Type Descending
Ascending
Re-site Descending
Ascending
Frequency Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Location Descending
Ascending
+/+? Parent #1 AKU_00053 08 c.504G>C r.(?) p.(Glu168Asp) E168D rs780173554 missense Protomer destabilisation, Hexamer disruption Phornphutkul et al. (2002) CpG AKU_DB_394a substitution - - DNA SEQ exon
+/+? Parent #2 AKU_00053 08 c.504G>C r.(?) p.(Glu168Asp) E168D rs780173554 missense Protomer destabilisation, Hexamer disruption Phornphutkul et al. (2002) CpG AKU_DB_394b substitution - - DNA SEQ exon