homogentisate 1,2-dioxygenase (HGD) - 4368 nt intron 03 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.7715
gtacaaggattagatgaattctgacctgcagactgtgggtactatgacagggactttgtg  c.176+60

         .         .         .         .         .         .  g.7775
ctgcctccttcccctgggccacagcctcccagagctgcccaagatcctgcttcttatagg  c.176+120

         .         .         .         .         .         .  g.7835
ctatggtctgggtcatggtcagaagagaatgaacttcctgccagctagcaccaagtgact  c.176+180

         .         .         .         .         .         .  g.7895
ggtggaagaaggtgaaggaaagctgcacagagctgggaaaatacacatgtccagttccat  c.176+240

         .         .         .         .         .         .  g.7955
ttacaaattacctcctatattcagaaggaaatattcctaatagtttggtcttcttctaaa  c.176+300

         .         .         .         .         .         .  g.8015
gactgtcctgttgagttttggcttggggtttacctgttttgttttgttttataatgacta  c.176+360

         .         .         .         .         .         .  g.8075
agtcacaattatggaagattcagagcaatatctttctcagctgactagaggtatgttctt  c.176+420

         .         .         .         .         .         .  g.8135
tgcaagaaaatgttgggtaaacgaagtttggatagttaaaaagtcacatattatggccca  c.176+480

         .         .         .         .         .         .  g.8195
ctgtggtttgaattaataaggtttttactctggtattcgcctttgctagaaaccagcata  c.176+540

         .         .         .         .         .         .  g.8255
ttcatttacatactgtgccatgttccatgtttgctctaatcctacatccaggtcaatgaa  c.176+600

         .         .         .         .         .         .  g.8315
cgtaatcccttgattaactcatatcaggcaggttggatgcagtatgtgttatagttttgg  c.176+660

         .         .         .         .         .         .  g.8375
gaggcagtaagtgttatgatttaaacaaatagtgtctaattataaaaattttaggctgag  c.176+720

         .         .         .         .         .         .  g.8435
gtatttgtgaagaggaatgctgctggtattagagactcggggagaagggcatgtggtctt  c.176+780

         .         .         .         .         .         .  g.8495
gtactgcttagtagggcagcctgggtttatctccacaggtccttctgagaagcaaatgag  c.176+840

         .         .         .         .         .         .  g.8555
atagtaagtaaaaaactataatggaccacacaaatgataaagattgcaaggtttaatcat  c.176+900

         .         .         .         .         .         .  g.8615
ggccaccctggaggcaggccccctaagtataaatcctggctccttttccagctgtgtggc  c.176+960

         .         .         .         .         .         .  g.8675
cttgggtaaatcatctgccctcttggatcctctagttcttcattcgtaaaacaaagataa  c.176+1020

         .         .         .         .         .         .  g.8735
ttatggtacctatttcatagctgtggtgaggattaaaagaaaggatgtgtgtaaagcaca  c.176+1080

         .         .         .         .         .         .  g.8795
ttagcttagcttagcacattggcacaggcacatggttagtgctcagttaatgctagttat  c.176+1140

         .         .         .         .         .         .  g.8855
tgtcatgataactatcattaagtattgccatcatagcagagtttctgcctcatttccagg  c.176+1200

         .         .         .         .         .         .  g.8915
gtatctctaggaggctgtcaagagaactgggcatgatatgtggcaagtgctatgttacaa  c.176+1260

         .         .         .         .         .         .  g.8975
tgtcagtatcaacagtacttttctctcaatagatatatgcgtgggaagaggaagagatag  c.176+1320

         .         .         .         .         .         .  g.9035
agaaagatttctatacatgtcaaaaatcaggggataattccttcactatttaatcatctc  c.176+1380

         .         .         .         .         .         .  g.9095
tctctctctctctgtaagcccaaatagggtaagataagcacgcagataattctgtccatt  c.176+1440

         .         .         .         .         .         .  g.9155
ctaatttatgacaacctgtcctctatgactatgttcttgactttatggcccattccctaa  c.176+1500

         .         .         .         .         .         .  g.9215
caggccacctggtctccggattctgcagcctgtccccattattcagcaatatcttcagcc  c.176+1560

         .         .         .         .         .         .  g.9275
agcaggagctgagctttgttccagcaggctgaaaaggagctgttggcatttcattaagaa  c.176+1620

         .         .         .         .         .         .  g.9335
gctggcactgttccctgaatcagaattaaatctctgttcagggcaatgtagtactgcctg  c.176+1680

         .         .         .         .         .         .  g.9395
gggagttttataaactcagctaaaaaataagggacactaggtatggctcacccatctatt  c.176+1740

         .         .         .         .         .         .  g.9455
tagaagaactctccaaagatatccacaagaattttgtggaaatgcttcccacccaaaatc  c.176+1800

         .         .         .         .         .         .  g.9515
tccagtgggaaaatgggaccagtcttatccataagtaggccagcctgaaattcttagtta  c.176+1860

         .         .         .         .         .         .  g.9575
ctactcatctgaaccatagcatacagggccaccacaaaactattaaagagtctatctacc  c.176+1920

         .         .         .         .         .         .  g.9635
tacctacgtacctacctacctacctatcagggattaatttttatcagattagctagctga  c.176+1980

         .         .         .         .         .         .  g.9695
ttgatcccttgggtcttgaaaaggcaaaagtctggagagataatttggaaaatgtggact  c.176+2040

         .         .         .         .         .         .  g.9755
gtgataaaaattcagaagattaagagaagaaaggcaatttaacaaacacatgataagcca  c.176+2100

         .         .         .         .         .         .  g.9815
gcagctactgtatgccaggcatttttggtacacaaactctctgagttctcacaacaatct  c.176+2160

         .         .      g.9839
taggtgacaaggatgaagaacata  c.176+2184

--------------------- middle of intron ---------------------
                        g.9840          .         .           g.9863
                        c.177-2184  aggttcaggaagtctagtaactct  c.177-2161

.         .         .         .         .         .           g.9923
cccaggatcacacaggtggttccaagacatacacacatgctctgaacttcatatactggg  c.177-2101

.         .         .         .         .         .           g.9983
agctggagaggcttagtaagaccaaggtctgaggtcacgtcatcaagagatggagaaatc  c.177-2041

.         .         .         .         .         .           g.10043
aaatggaaactaaacagatctagccctttttcccccagatggctcaatgttgggccaggc  c.177-1981

.         .         .         .         .         .           g.10103
caactcaactcactgaggtagactgtccttggtcttgaaagggccagagcctgttgattc  c.177-1921

.         .         .         .         .         .           g.10163
aggtctggtcttccgttgtccttctgtattttgtcagggcagtaccctctgaaaggactt  c.177-1861

.         .         .         .         .         .           g.10223
gggtccctcttagtgagcttcaatgtcccttccagcttctggaaggtcttatcctggtgt  c.177-1801

.         .         .         .         .         .           g.10283
cctttcagattcctttatcagagtcttcttcccttcctgaagcctgagatctggtcctgg  c.177-1741

.         .         .         .         .         .           g.10343
tagagaggacacactttaaaaagaaaagaaagaaagacaaataaaggcataaatgtacta  c.177-1681

.         .         .         .         .         .           g.10403
caataaaacatggacatacactcttataattttagagtacagaagtgttaatttattttt  c.177-1621

.         .         .         .         .         .           g.10463
attttattttaagttccagggtataggtgcaggatgcacaggtttgttacataggtaaat  c.177-1561

.         .         .         .         .         .           g.10523
gtgtgccatggtggtttgctgcacttatcaacctatcacctaagtattaagcccagcata  c.177-1501

.         .         .         .         .         .           g.10583
cattagccatttttttaatgctctccctcccccaactcccaccccccaacaggccccagt  c.177-1441

.         .         .         .         .         .           g.10643
gtgtgttattcccctcactgtgtccatgtgttctcattgttcagctcccacttatgagtg  c.177-1381

.         .         .         .         .         .           g.10703
agaacatgcagtgtttggttttctgttcctgctttagttcgctgagaatattggcttcca  c.177-1321

.         .         .         .         .         .           g.10763
gttccatccatgtccctgcaaaggtcatgatctcattcctttttatggctgcatagtatt  c.177-1261

.         .         .         .         .         .           g.10823
ccatggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggtt  c.177-1201

.         .         .         .         .         .           g.10883
gattctatgtctttgcattgtgaatagtgctgcaataaacatacgtgtgcatgtatcttc  c.177-1141

.         .         .         .         .         .           g.10943
ataacagattgatttatattcctttgggtatacacccagtaatgggattgctgggtcaaa  c.177-1081

.         .         .         .         .         .           g.11003
tggtatttctcattgtaggtctttgaggaatcaccacactgccttccacaatggttgaac  c.177-1021

.         .         .         .         .         .           g.11063
taatttacattcccaccaacagtgtaaaagcattcttatctctccacagcctttccagaa  c.177-961

.         .         .         .         .         .           g.11123
tctttttctcttataaattaatatcaaaaagacaaacccaatagaaaatgataaaggact  c.177-901

.         .         .         .         .         .           g.11183
tctacaagtaattcacagaaaaactataaagagccaataaacaaatagacttgttttttg  c.177-841

.         .         .         .         .         .           g.11243
gaaatattttgtattttctaattcataataaaggaaatacaaaataaaatgagatactat  c.177-781

.         .         .         .         .         .           g.11303
ttttcacctaaaacactaaaatttttaataatactccagatttgtgaagatgtgggtgac  c.177-721

.         .         .         .         .         .           g.11363
caggcactctcacacgttgttagtatgataataaagagttaaaatgatctgataattttg  c.177-661

.         .         .         .         .         .           g.11423
tttagaaatgcactggacgtatctgaaagaatatataagaaatatataagaaaatcacta  c.177-601

.         .         .         .         .         .           g.11483
agctctgatgcctctgaggaatagccctgaagaaactggaggacgaaggtgccatttacc  c.177-541

.         .         .         .         .         .           g.11543
tttcaggactttttaattacttgaattatttttacctttggcatgtattacttttgtaat  c.177-481

.         .         .         .         .         .           g.11603
tttaaaggagaaaattgatttactatttcaaaaataacaaagataccacccatattctct  c.177-421

.         .         .         .         .         .           g.11663
caagctgcgtagaactcattgttcttgccttccagagcaaggactagcatcctatgatac  c.177-361

.         .         .         .         .         .           g.11723
acacataagctaatgtttttctatggattttcctacacagatatccctcaaggtacttcc  c.177-301

.         .         .         .         .         .           g.11783
ccttcccttatagtttttagaaaagacaattcttcattttttggcagcatggaaataacc  c.177-241

.         .         .         .         .         .           g.11843
atgagtcagagtccatttgaagcatgatgggtggaatgaaaaagtgagaagaggccaggg  c.177-181

.         .         .         .         .         .           g.11903
ctgtgggcagcagatggccatgaaaagtgatgctgtatcattgcttcactgcttcacaca  c.177-121

.         .         .         .         .         .           g.11963
ttagagcctacaggtcgttgttgacttgagtgtcttcctgatggtactgcctgagccatt  c.177-61

.         .         .         .         .         .           g.12023
ctgtgtatcactcagaacattactctaaggcttgtatatcttgtatgtttttccctctag  c.177-1


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