LOVD - Variant listings for HGD

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+/+? AKU_00020 04 c.217T>C
    + c.1078G>C
r.(?) p.(Phe73Leu) F73L rs2472786163 missense Protomer destabilisation, Hexamer disruption Vilboux et al. (2009) CCC triplet AKU_TR2_0122a substitution - - DNA SEQ exon AKU_TR2_0122 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Spain 1 1
+/+? AKU_00256 04 c.221A>T
    + c.1095_1100dup
r.(?) p.(Glu74Val) E74V rs141965690 missense - Hu et al. (2012) - AKU_DB_425a substitution ? - DNA SEQ exon AKU_DB_425 AKU Hu et al. (2012), Taiwan:Taipei Compound heterozygous 1 China 1 1
-?/-? AKU_00113 04 c.240A>T r.(?) p.(His80Gln) H80Q rs2255543 missense/polymorphism - de Bernabe et al. (1998) - AKU_POL_7 substitution (+)NlaIII 0,22(A) DNA SEQ exon AKU_POL_7 - de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava - 1 - 1 1
-/? AKU_00129 04 c.260A>C r.(?) p.(Glu87Ala) E87A rs35702995 missense/polymorphism Protomer destabilisation, Hexamer disruption Vilboux et al. (2009) - AKU_POL_23 substitution (+)SfaNI - DNA SEQ exon AKU_POL_23 - Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava - 1 - 1 1
+/+? AKU_00021 04 c.274C>A
    + c.(?)
r.(?) p.(Pro92Thr) P92T rs2472785351 missense Hexamer disruption Phornphutkul et al. (2002) - AKU_VIL_40a substitution (-)BsaBI - DNA SEQ exon AKU_VIL_40 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
-?/? AKU_00116 04i c.282+31A>G r.(?) p.(?) ivs4+31A>G rs1800722 polymorphism - de Bernabe et al. (1999b) - AKU_POL_10 substitution - 0,02(G) DNA SEQ intron AKU_POL_10 - de Bernabe et al. (1999b), Slovakia (Slovak Republic):Bratislava - 1 - 1 1
-?/? AKU_00130 04i c.283-145C>T r.(?) p.(?) ivs4-145C>T - polymorphism - Vilboux et al. (2009) - AKU_POL_24 substitution - 0,032(T) DNA SEQ intron AKU_POL_24 - Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava - 1 - 1 1
-?/? AKU_00117 04i c.283-14insA r.(?) p.(?) ivs4-14insA - polymorphism - AKU database - AKU_POL_11 insertion - 0,01(A) DNA SEQ intron AKU_POL_11 - AKU database, Slovakia (Slovak Republic):Bratislava - 1 - 1 1
-?/? AKU_00118 04i c.283-4T>C r.(?) p.(?) ivs4-4T>C - aberrant splicing (AS)/exon skipping, polymorphism? - AKU database - AKU_POL_12 substitution - 0,001(C) DNA SEQ intron AKU_POL_12 - AKU database, Slovakia (Slovak Republic):Bratislava - 1 - 1 1
+/+ AKU_00197 05_06 c.283-9199_c.434+1688del
    + c.674G>A
r.(?) p.(Leu95Metfs*33) ex5,6 del - deletion - Ascher et al. (2019) CpG AKU_TR2_0115b deletion - - DNA SEQ, MLPA exon AKU_TR2_0115 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Netherland 1 1
+/+? AKU_00022 05 c.289T>C
    + c.359G>T
r.(?) p.(Trp97Arg) W97R rs2472725122 missense Protomer destabilisation Phornphutkul et al. (2002) - AKU_VIL_49a substitution - - DNA SEQ exon AKU_VIL_49 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00022 05 c.289T>C
    + c.359G>T
r.(?) p.(Trp97Arg) W97R rs2472725122 missense Protomer destabilisation Phornphutkul et al. (2002) - AKU_VIL_51a substitution - - DNA SEQ exon AKU_VIL_51 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+ AKU_00023 05 c.289T>G
    + c.289T>G
r.(?) p.(Trp97Gly) W97G rs2472725122 missense Protomer destabilisation de Bernabe et al. (1998) - AKU_DB_14a substitution (+)MnlI - DNA SEQ exon AKU_DB_14 AKU de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava Homozygot 1 France 3 1
+/+ AKU_00023 05 c.289T>G
    + c.289T>G
r.(?) p.(Trp97Gly) W97G rs2472725122 missense Protomer destabilisation de Bernabe et al. (1998) - AKU_DB_14b substitution (+)MnlI - DNA SEQ exon AKU_DB_14 AKU de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava Homozygot 1 France 3 1
+/+ AKU_00023 05 c.289T>G
    + c.961C>T
r.(?) p.(Trp97Gly) W97G rs2472725122 missense Protomer destabilisation de Bernabe et al. (1998) - AKU_DB_19a substitution (+)MnlI - DNA SEQ exon AKU_DB_19 AKU Rodriguez et al. (2000), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Switzerland 1 1
+/+ AKU_00023 05 c.289T>G
    + c.688C>T
r.(?) p.(Trp97Gly) W97G rs2472725122 missense Protomer destabilisation de Bernabe et al. (1998) - AKU_TR2_0307b substitution (+)MnlI - DNA SEQ exon AKU_TR2_0307 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 France 1 1
+/+ AKU_00023 05 c.289T>G
    + c.1102A>G
r.(?) p.(Trp97Gly) W97G rs2472725122 missense Protomer destabilisation de Bernabe et al. (1998) - AKU_TR3_0130b substitution (+)MnlI - DNA SEQ exon AKU_TR3_0130 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Belgium 1 1
+/+ AKU_00243 05 c.291G>A r.(?) p.(Trp97*) W97* rs766714128 nonsense - clinvar database - AKU_CV_01a substitution ? - DNA SEQ exon AKU_CV_01 AKU submitted, Dr. Andrea Zatkova, Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 ? 1 1
+/+ AKU_00243 05 c.291G>A
    + c.587C>T
r.(?) p.(Trp97*) W97* rs766714128 nonsense - clinvar database, Lee et al. (2022) - AKU_DB_422a substitution ? - DNA SEQ exon AKU_DB_422 AKU Lee et al. (2022), Taiwan:Taipei Compound heterozygous 1 Taiwan 1 1
+/+ AKU_00177 05 c.291G>C
    + c.291G>C
r.(?) p.(Trp97Cys) W97C rs766714128 missense - Ascher et al. (2019) - AKU_TR2_0118a substitution ? - DNA SEQ exon AKU_TR2_0118 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Poland 1 1
+/+ AKU_00177 05 c.291G>C
    + c.291G>C
r.(?) p.(Trp97Cys) W97C rs766714128 missense - Ascher et al. (2019) - AKU_TR2_0118b substitution ? - DNA SEQ exon AKU_TR2_0118 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Poland 1 1
+/+ AKU_00220 05 c.299T>C
    + c.1102A>G
r.(?) p.(Phe100Ser) F100S - missense Protomer destabilisation submitted, Dr. Andrea Zatkova - AKU_DB_283b substitution ? - DNA SEQ exon AKU_DB_283 AKU submitted, Dr. Andrea Zatkova, Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 France 1 1
+/+? AKU_00242 05 c.334T>G
    + c.808G>A
r.(?) p.(Phe112Val) F112V rs2472724557 missense ? Kisa et al. (2021) - AKU_TU_29a substitution ? - DNA SEQ exon AKU_TU_29 AKU Kisa et al. (2021), Turkey:Izmir Compound heterozygous 1 Turkey 1 1
+/+? AKU_00242 05 c.334T>G
    + c.334T>G
r.(?) p.(Phe112Val) F112V rs2472724557 missense ? Kisa et al. (2021) - AKU_DB_464a substitution ? - DNA SEQ exon AKU_DB_464 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 1 1
+/+? AKU_00242 05 c.334T>G
    + c.334T>G
r.(?) p.(Phe112Val) F112V rs2472724557 missense ? Kisa et al. (2021) - AKU_DB_464b substitution ? - DNA SEQ exon AKU_DB_464 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 1 1
+/+? AKU_00260 05 c.335T>C
    + c.342+1G>A
r.(?) p.(Phe112Ser) F112S rs2472724534 missense - Puente et al. (2022) - AKU_DB_435a substitution ? - DNA SEQ exon AKU_DB_435 AKU Puente et al. (2022), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Spain 2 1
+/+ AKU_00025 05i c.342+1G>A
    + c.481G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_41a substitution - - DNA SEQ intron AKU_DB_41 AKU Zatkova et al. (2000b), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Slovakia 1 1
+/+ AKU_00025 05i c.342+1G>A
    + c.342+1G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_51a substitution - - DNA SEQ intron AKU_DB_51 AKU Zatkova et al. (2000b), Slovakia (Slovak Republic):Bratislava Homozygot 1 Slovakia 2 1
+/+ AKU_00025 05i c.342+1G>A
    + c.342+1G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_51b substitution - - DNA SEQ intron AKU_DB_51 AKU Zatkova et al. (2000b), Slovakia (Slovak Republic):Bratislava Homozygot 1 Slovakia 2 1
+/+ AKU_00025 05i c.342+1G>A
    + c.457dupG
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_51b substitution - - DNA SEQ intron AKU_DB_51 AKU Zatkova et al. (2000b), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Slovakia 2 1
+/+ AKU_00025 05i c.342+1G>A
    + c.481G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_MUL_1a substitution - - DNA SEQ intron AKU_MUL_1 AKU Muller et al. (1999), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Czech republic 1 1
+/+ AKU_00025 05i c.342+1G>A
    + c.1017_1019delGAGinsTA
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_VIL_15a substitution - - DNA SEQ intron AKU_VIL_15 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+ AKU_00025 05i c.342+1G>A
    + c.342+1G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_301a substitution - - DNA SEQ intron AKU_DB_301 AKU Soltysova et al. (2021), Russia:Moscow Homozygot 1 Russia 1 1
+/+ AKU_00025 05i c.342+1G>A
    + c.342+1G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_301b substitution - - DNA SEQ intron AKU_DB_301 AKU Soltysova et al. (2021), Russia:Moscow Homozygot 1 Russia 1 1
+/+ AKU_00025 05i c.342+1G>A
    + c.335T>C
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>A rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - Muller et al. (1999) c.342+1G AKU_DB_435b substitution - - DNA SEQ intron AKU_DB_435 AKU Puente et al. (2022), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Spain 2 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_DB_9a substitution - - DNA SEQ intron AKU_DB_9 AKU de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava Homozygot 1 The Netherlands 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_DB_9b substitution - - DNA SEQ intron AKU_DB_9 AKU de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava Homozygot 1 The Netherlands 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.1102A>G
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_19a substitution - - DNA SEQ intron AKU_VIL_19 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.1102A>G
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_54a substitution - - DNA SEQ intron AKU_VIL_54 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_6a substitution - - DNA SEQ intron AKU_VIL_6 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Homozygot 1 USA 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_6b substitution - - DNA SEQ intron AKU_VIL_6 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Homozygot 1 USA 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_8a substitution - - DNA SEQ intron AKU_VIL_8 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Homozygot 1 USA 1 1
+/+ AKU_00024 05i c.342+1G>T
    + c.342+1G>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_VIL_8b substitution - - DNA SEQ intron AKU_VIL_8 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Homozygot 1 USA 1 1
+/+? AKU_00024 05i c.342+1G>T
    + c.472_496del
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_DB_123a substitution - - DNA SEQ intron AKU_DB_123 AKU Zatkova et al. (2012), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 2 1
+/+ AKU_00024 05i c.342+1G>T
    + c.140C>T
r.(spl?) p.(Leu95_Ser114del) ivs5+1G>T rs397515518 aberrant splicing (DS)/exon skipping/in frame deletion? - de Bernabe et al. (1998) c.342+1G AKU_DB_452a substitution - - DNA SEQ intron AKU_DB_452 AKU submitted, Dr. Andrea Zatkova, Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Sweden 1 1
+/+ AKU_00166 05i c.342+3A>C
    + c.124delG (not c.115delG)
r.(spl?) p.(Leu95_Ser114del) ivs5+3A>C rs1182670238 aberrant splicing (DS)/exon skipping/in frame deletion? - Li et al. (2014) - AKU_DB_201b substitution ? - DNA SEQ exon AKU_DB_201 AKU Li et al. (2014), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 China 1 1
+/+ AKU_00166 05i c.342+3A>C
    + c.342+3A>C
r.(spl?) p.(Leu95_Ser114del) ivs5+3A>C rs1182670238 aberrant splicing (DS)/exon skipping/in frame deletion? - Li et al. (2014) - AKU_DB_252a substitution ? - DNA SEQ exon AKU_DB_252 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+ AKU_00166 05i c.342+3A>C
    + c.342+3A>C
r.(spl?) p.(Leu95_Ser114del) ivs5+3A>C rs1182670238 aberrant splicing (DS)/exon skipping/in frame deletion? - Li et al. (2014) - AKU_DB_252b substitution ? - DNA SEQ exon AKU_DB_252 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+ AKU_00166 05i c.342+3A>C
    + c.1006+6T>C
r.(spl?) p.(Leu95_Ser114del) ivs5+3A>C rs1182670238 aberrant splicing (DS)/exon skipping/in frame deletion - Li et al. (2014) - AKU_DB_279a substitution ? - DNA SEQ exon AKU_DB_279 AKU Cho a Kim 2018, Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 Korea 1 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - submitted, Dr. Mohammed Alsbou - AKU_DB_451a substitution ? - DNA SEQ intron AKU_DB_451 AKU submitted, Dr. Mohammed Alsbou, Jordan:Karak Homozygot 1 Iraq 1 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - submitted, Dr. Mohammed Alsbou - AKU_DB_451b substitution ? - DNA SEQ intron AKU_DB_451 AKU submitted, Dr. Mohammed Alsbou, Jordan:Karak Homozygot 1 Iraq 1 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_459a substitution ? - DNA SEQ intron AKU_DB_459 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 3 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_459b substitution ? - DNA SEQ intron AKU_DB_459 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 3 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_460a substitution ? - DNA SEQ intron AKU_DB_460 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 4 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_460b substitution ? - DNA SEQ intron AKU_DB_460 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 4 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_461a substitution ? - DNA SEQ intron AKU_DB_461 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 1 1
+/+ AKU_00214 05i c.342+5G>A
    + c.342+5G>A
r.(spl?) p.(Leu95_Ser114del) ivs5+5G>A - aberrant splicing (DS)/exon skipping/in frame deletion? - Azami et al. (2025) - AKU_DB_461b substitution ? - DNA SEQ intron AKU_DB_461 AKU Azami et al. (2025), Slovakia (Slovak Republic):Bratislava Homozygot 1 Iran 1 1
-?/? AKU_00119 05i c.342+25T>C r.(?) p.(?) ivs5+25T>C rs2551607 polymorphism - de Bernabe et al. (1998) - AKU_POL_13 substitution - 0,12(C.) DNA SEQ intron AKU_POL_13 - de Bernabe et al. (1998), Slovakia (Slovak Republic):Bratislava - 1 - 1 1
+/+? AKU_00192 05i c.343-11G>A
    + c.343-11G>A, c.650-13T>G, c.650-13T>G
r.(?) p.(?) ivs5-11G>A rs143223637 polymorphism (splicing minigene experiment) - Ascher et al. (2019) - AKU_TR2_0332c substitution - - DNA/RNA SEQ intron AKU_TR_0332 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Mali 1 1
+/+? AKU_00192 05i c.343-11G>A
    + c.343-11G>A, c.650-13T>G, c.650-13T>G
r.(?) p.(?) ivs5-11G>A rs143223637 polymorphism (splicing minigene experiment) - Ascher et al. (2019) - AKU_TR2_0332d substitution - - DNA/RNA SEQ intron AKU_TR_0332 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Mali 1 1
+/+? AKU_00146 06 c.343G>C
    + c.1290_1300del
r.(?) p.(Gly115Arg) G115R rs755734596 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_124a substitution (+)PleI, HinfI - DNA SEQ exon AKU_DB_124 AKU Zatkova et al. (2012), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00146 06 c.343G>C
    + c.1081G>A
r.(?) p.(Gly115Arg) G115R rs755734596 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_126a substitution (+)PleI, HinfI - DNA SEQ exon AKU_DB_126 AKU Zatkova et al. (2012), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom/France 1 1
+/+? AKU_00146 06 c.343G>C
    + c.1102A>G
r.(?) p.(Gly115Arg) G115R rs755734596 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_222b substitution (+)PleI, HinfI - DNA SEQ exon AKU_DB_222 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00146 06 c.343G>C
    + c.1081G>A
r.(?) p.(Gly115Arg) G115R rs755734596 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_269a substitution (+)PleI, HinfI - DNA SEQ exon AKU_DB_269 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00026 06 c.347T>C
    + c.347T>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_112a substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_112 AKU Zatkova et al. (2012), Slovakia (Slovak Republic):Bratislava Homozygot 1 India 1 1
+/+? AKU_00026 06 c.347T>C
    + c.347T>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_112b substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_112 AKU Zatkova et al. (2012), Slovakia (Slovak Republic):Bratislava Homozygot 1 India 1 1
+/+? AKU_00026 06 c.347T>C
    + c.674G>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_226a substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_226 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00026 06 c.347T>C
    + c.347T>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_275a substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_275 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+? AKU_00026 06 c.347T>C
    + c.347T>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_275b substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_275 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+? AKU_00026 06 c.347T>C
    + c.674G>C
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_270b substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_270 AKU submitted, Dr. Jeannette Usher, United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00026 06 c.347T>C
    + c.808G>A
r.(?) p.(Leu116Pro) L116P rs569846003 missense Protomer destabilisation Zatkova et al. (2012) - AKU_DB_392a substitution (+)FauI, AciI - DNA SEQ exon AKU_DB_392 AKU Danda et al. (2020), India:Vellore Compound heterozygous 1 India 1 1
+/+ AKU_00027 06 c.357dupG r.(?) p.(Cys120Valfs*9) C120fs rs2472717033 frameshift - Phornphutkul et al. (2002) - AKU_PHO_8 insertion (+)BslI ? - DNA SEQ exon AKU_PHO_8 AKU Phornphutkul et al. (2002), Slovakia (Slovak Republic):Bratislava ? 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1336T>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_13a substitution - - DNA SEQ exon AKU_VIL_13 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1102A>G
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_18a substitution - - DNA SEQ exon AKU_VIL_18 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1102A>G
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_28a substitution - - DNA SEQ exon AKU_VIL_28 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.11T>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_30b substitution - - DNA SEQ exon AKU_VIL_30 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.11T>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_32b substitution - - DNA SEQ exon AKU_VIL_32 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.289T>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_49b substitution - - DNA SEQ exon AKU_VIL_49 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.289T>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_51b substitution - - DNA SEQ exon AKU_VIL_51 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1102A>G
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_55a substitution - - DNA SEQ exon AKU_VIL_55 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1078G>C
r.(?) p.(Cys120Phe C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_65a substitution - - DNA SEQ exon AKU_VIL_65 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1078G>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_VIL_68a substitution - - DNA SEQ exon AKU_VIL_68 AKU Vilboux et al. (2009), Slovakia (Slovak Republic):Bratislava Compound heterozygous 1 USA 1 1
+/+? AKU_00028 06 c.359G>T
    + c.589A>G
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_DB_120a substitution - - DNA SEQ exon AKU_DB_120 AKU Zatkova et al. (2012), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 2 1
+/+? AKU_00028 06 c.359G>T
    + c.125A>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_DB_203a substitution - - DNA SEQ exon AKU_DB_203 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom 1 1
+/+? AKU_00028 06 c.359G>T
    + c.359G>T
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_DB_218a substitution - - DNA SEQ exon AKU_DB_218 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+? AKU_00028 06 c.359G>T
    + c.359G>T
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_DB_218b substitution - - DNA SEQ exon AKU_DB_218 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Homozygot 1 United Kingdom 1 1
+/+? AKU_00028 06 c.359G>T
    + c.1078G>C
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_DB_227b substitution - - DNA SEQ exon AKU_DB_227 AKU Usher et al. (2015), United Kingdom (Great Britain):Liverpool Compound heterozygous 1 United Kingdom/France 1 1
+/+? AKU_00028 06 c.359G>T
    + c.359G>T
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_TR2_0121a substitution - - DNA SEQ exon AKU_TR2_0121 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Wales 1 1
+/+? AKU_00028 06 c.359G>T
    + c.359G>T
r.(?) p.(Cys120Phe) C120F rs752153829 missense Protomer destabilisation Vilboux et al. (2009) - AKU_TR2_0121b substitution - - DNA SEQ exon AKU_TR2_0121 AKU Ascher et al. (2019), Slovakia (Slovak Republic):Bratislava Homozygot 1 Wales 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_73a substitution - - DNA SEQ exon AKU_DB_73 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_73b substitution - - DNA SEQ exon AKU_DB_73 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_74a substitution - - DNA SEQ exon AKU_DB_74 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_74b substitution - - DNA SEQ exon AKU_DB_74 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_75a substitution - - DNA SEQ exon AKU_DB_75 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_75b substitution - - DNA SEQ exon AKU_DB_75 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_76a substitution - - DNA SEQ exon AKU_DB_76 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_76b substitution - - DNA SEQ exon AKU_DB_76 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_78a substitution - - DNA SEQ exon AKU_DB_78 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_78b substitution - - DNA SEQ exon AKU_DB_78 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
+/+? AKU_00029 06 c.360T>G
    + c.360T>G
r.(?) p.(Cys120Trp) C120W rs149165166 missense Protomer destabilisation Goicoechea de Jorge et al. (2002) - AKU_DB_79a substitution - - DNA SEQ exon AKU_DB_79 AKU Goicoechea de Jorge et al. (2002), Slovakia (Slovak Republic):Bratislava Homozygot 1 Dominican republic 1 1
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Coding DNA Reference Sequence: NM_000187.3, the first base of the Met-codon is counted as position 1.

Some specific features:
Exon: (00) stands for any exon; (i) indicates intron.
DNA: (c.?) or wobble code is used when nucleotide change was not known or not indicated
Variant original description: brief name of the mutation; if original description of the mutation was different, it is indicated after comma
Remarks: description of the variant, CR= cryptic, AS= acceptor site, DS=donor site
Predicted Mutation Effect**: The effects of the novel missense variants on stability and protein-protein afinity was assessed in the context
of the molecular interactions of the wild-type residue using mCSM Pires et al. (2014a) and DUET Pires et al. (2014b). Details are downloadable here: TABLE

Allele_code: i.e. patient with the Patient_ID (AKU_AQR_11) has alleles AKU_AQR_11a and AKU_AQR_11b
Restriction site: mutation abolishes (-) or creates (+) specific restriction site
Frequency: of specific polymorphic alleles (AKUdatabase or Vilboux at al. (2009))
Patient_ID: in cases with ID starting with AKU_DB_ we report also HGD haplotypes that can be found in this link: HGD haplotypes associated with AKU mutations
DBID: AKU_00000 is used for alleles with unknown mutation

References not present in PubMed:
Aquaron et al. (2009) (not listed in PubMed): Current Rheumatology Reviews, 2009, 5:111-125. https://doi.org/10.2174/157339709788298419
Cho end Kim (2018) (not listed in PubMed): J Genet Med, 2018, 15:17-19. https://doi.org/10.5734/JGM.2018.15.1.17
Kilavuz et al. (2018) (not listed in PubMed): J. Pediatr. Res. 2018, 5: 7-11. https://doi.org/10.4274/jpr.20982
Akbaba et al. (2020) (not listed in PubMed): JPEM, 33 (2): 289-294, https://doi.org/10.1515/jpem-2019-0163
Mwafi et al. (2021) (not listed in PubMed): AIMS Molecular Science, 8 (1): 60-75, https://doi.org/10.3934/molsci.2021005
Noorian et al. (2018) (not listed in PubMed): Meta Gene, 18: 174-176, https://doi.org/10.1016/j.mgene.2018.09.006

Legend: [ HGD full legend ]
Sequence variations are described basically as recommended by the Ad-Hoc Committee for Mutation Nomenclature (AHCMN), with the recently suggested additions (den Dunnen JT and Antonarakis SE [2000], Hum.Mut. 15:7-12); for a summary see Nomenclature. Coding DNA Reference Sequence, with the first base of the Met-codon counted as position 1.
Path.: Variant pathogenicity, in the format Reported/Concluded; '+' indicating the variant is pathogenic, '+?' probably pathogenic, '-' no known pathogenicity, '-?' probably no pathogenicity, '?' effect unknown. HGD DB-ID: Database IDentifier; When available, links to OMIM ID's are provided. Exon: Exon numbering. DNA change: Variation at DNA-level. If present, "Full Details" will show you the the full-length entry. RNA change: Variation at RNA-level, (?) unknown but probably identical to DNA. Protein: Variation at protein level. Original description: Variant_original_description Links: Links Variant remarks: Variant remarks Predicted Mutation Effect**: The effects of the novel missense variants on stability and protein-protein afinity was assessed in the context of the molecular interactions of the wild-type residue using mCSM and DUET. Reference: Reference describing the variation, "Submitted:" indicating that the mutation was submitted directly to this database. Mutation HOT-SPOT: mutation_HOT_SPOT Allele code: Allele_code Type: Type of variant at DNA level. Re-site: Variant creates (+) or destroys (-) a restriction enzyme recognition site. Frequency: Frequency if variant is non pathogenic. Template: Variant detected in DNA, RNA and/or Protein. Technique: Technique used to detect the variation. Location: Variant location at DNA level. Patient ID: Internal reference to the patient. Disease: Disease phenotype, as reported in paper/by submitter, unless modified by the curator. Reference: Reference describing the patient, "Submitted:" indicating that the mutation was submitted directly to this database. # Reported: Number of times this case has been reported Geographic origin: Geographic origin of patient Patient/Affected_per_Family: Number of patients per family Families Patients: test